STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05229.1Protein of unknown function UPF0058; PFAM: Uncharacterised protein family UPF0058; KEGG: nmg:Nmag_3221 protein of unknown function UPF0058. (92 aa)    
Predicted Functional Partners:
AEN05230.1
KEGG: nph:NP2720A hypothetical protein.
     
 0.913
AEN05228.1
KEGG: ter:Tery_1305 hypothetical protein.
       0.844
AEN04926.1
PFAM: Phosphoesterase, RecJ-like; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hvo:HVO_1018 hypothetical protein.
  
   
 0.737
cofC
2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.710
AEN05274.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; Ribosomal protein S1, RNA binding domain; KEGG: hla:Hlac_1616 nucleic acid binding OB-fold tRNA/helicase-type.
  
   
 0.704
AEN05417.1
Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain protein; PFAM: Protein of unknown function DUF293, archaea; KEGG: hbo:Hbor_16490 transcriptional regulator, contains C-terminal cbs domains.
  
     0.689
AEN07221.1
Transcriptional regulator, MarR family; KEGG: hbo:Hbor_24020 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, Crp.
 
     0.673
AEN06334.1
KEGG: hla:Hlac_2217 hypothetical protein.
  
     0.658
AEN05484.1
KEGG: htu:Htur_1893 tRNA-dihydrouridine synthase-like protein.
  
     0.637
AEN06932.1
PFAM: Ribonuclease R winged-helix domain; KEGG: nmg:Nmag_1785 ribonuclease R winged-helix domain protein.
  
     0.608
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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