Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN05267.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
AEN05268.1
KEGG: hbo:Hbor_34900 hypothetical protein.
       0.594
AEN05266.1
KEGG: htu:Htur_1718 hypothetical protein.
       0.553
AEN05262.1
KEGG: hbo:Hbor_30440 hypothetical protein.
       0.406
AEN05263.1
KEGG: hbo:Hbor_30450 nitrous oxidase accessory protein; TIGRFAM: parallel beta-helix repeat containing protein; PFAM: Periplasmic copper-binding.
       0.406
AEN05264.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: hbo:Hbor_30460 ABC-type multidrug transport system, ATPase component; SMART: ATPase, AAA+ type, core.
       0.406
AEN05265.1
KEGG: hbo:Hbor_30470 hypothetical protein.
       0.406
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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