Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN05374.1TIGRFAM: Conserved hypothetical protein CHP03172; KEGG: hje:HacjB3_08430 anaerobic dehydrogenase cluster protein. (243 aa)    
Predicted Functional Partners:
AEN04984.1
KEGG: htu:Htur_3932 molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase.
     0.718
AEN05375.1
PFAM: Polysaccharide deacetylase; KEGG: hje:HacjB3_16191 hypothetical protein.
       0.588
AEN06753.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_25840 archaeal flagella assembly protein J.
  
     0.537
AEN06826.1
KEGG: hmu:Hmuk_0317 hypothetical protein.
  
     0.455
AEN05658.1
KEGG: hla:Hlac_1884 ATP-grasp protein-like protein.
  
     0.414
AEN07242.1
PFAM: Protein of unknown function DUF1405; KEGG: hvo:HVO_2515 hypothetical protein.
  
     0.413
AEN07223.1
KEGG: hvo:HVO_0814 chaperone; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.411
AEN04839.1
KEGG: hma:rrnAC0905 hypothetical protein.
  
     0.400
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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