Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN05414.1KEGG: hbo:Hbor_16650 hypothetical protein. (514 aa)    
Predicted Functional Partners:
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
 
     0.781
AEN06956.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_0497 bacterio-opsin activator HTH domain protein.
  
     0.475
AEN04562.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC2472 bacterio-opsin activator.
  
     0.453
AEN05445.1
KEGG: hvo:HVO_2860 YcaO-like family domain-containing protein; TIGRFAM: biosynthesis docking scaffold protein, SagD family; YcaO-like; PFAM: YcaO-like.
  
     0.426
AEN05549.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: hvo:HVO_2852 hypothetical protein.
  
     0.424
AEN06225.1
KEGG: hbo:Hbor_20700 hypothetical protein.
 
     0.404
AEN05416.1
KEGG: hbo:Hbor_16570 zn-dependent hydrolase of beta-lactamase fold family.
       0.401
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
  
     0.400
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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