Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN05596.1Hypothetical protein; Manually curated; KEGG: hje:HacjB3_16946 hypothetical protein. (233 aa)    
Predicted Functional Partners:
AEN05597.1
KEGG: hut:Huta_1890 hypothetical protein.
       0.773
AEN05598.1
PFAM: DNA-directed DNA polymerase, family B, conserved region; KEGG: hje:HacjB3_16936 DNA polymerase I.
       0.773
AEN05599.1
SMART: ATPase, AAA+ type, core; KEGG: nmg:Nmag_2694 ORC1/cdc6 family replication initiation protein.
       0.542
AEN05594.1
KEGG: hbo:Hbor_11050 propionyl-CoA carboxylase carboxyltransferase subunit; PFAM: Carboxyl transferase.
       0.487
AEN05595.1
KEGG: nmg:Nmag_3093 hypothetical protein.
       0.487
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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