Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN05604.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AEN05603.1
PFAM: PilT protein, N-terminal; KEGG: hmu:Hmuk_0267 PilT protein domain protein.
       0.784
AEN05605.1
TIGRFAM: Threonine synthase; KEGG: hla:Hlac_1608 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
       0.639
AEN05602.1
KEGG: hvo:HVO_2482 phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
       0.574
AEN05606.1
Hypothetical protein; KEGG: tsc:TSC_c15780 N-6 DNA methylase family.
       0.501
AEN05601.1
MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: nmg:Nmag_3206 MOSC domain containing protein.
       0.433
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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