Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN05615.1KEGG: hmu:Hmuk_0600 hypothetical protein. (145 aa)    
Predicted Functional Partners:
AEN05614.1
KEGG: hbo:Hbor_05440 hypothetical protein.
       0.873
AEN05616.1
KEGG: hbo:Hbor_05480 (SSU ribosomal protein s18p)-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase.
       0.870
AEN05613.1
PFAM: NUDIX hydrolase domain; KEGG: hbo:Hbor_05430 ADP-ribose pyrophosphatase.
       0.705
AEN05612.1
Rhodanese-like protein; KEGG: hbo:Hbor_05420 rhodanese-related sulfurtransferase; PFAM: Rhodanese-like; SMART: Rhodanese-like.
       0.471
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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