STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05617.1KEGG: hma:rrnAC2158 aconitate hydratase; TIGRFAM: Aconitase, putative; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. (656 aa)    
Predicted Functional Partners:
AEN06906.1
TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: hla:Hlac_0723 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase-like.
  
 0.998
AEN06503.1
TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: hsl:OE3634F isocitrate dehydrogenase (NADP); PFAM: Isocitrate/isopropylmalate dehydrogenase.
 
 0.990
AEN07018.1
KEGG: hvo:HVO_2588 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase.
 
 0.990
AEN05365.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.901
AEN05639.1
KEGG: hma:rrnAC1093 succinate dehydrogenase iron-sulfur protein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
  
 
 0.873
AEN05093.1
KEGG: hla:Hlac_0706 NADH-ubiquinone oxidoreductase chain 49kDa; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit.
  
 
 0.867
AEN05845.1
KEGG: hje:HacjB3_10520 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase.
 0.809
rpl40e
KEGG: hut:Huta_1320 50S ribosomal protein L40e; HAMAP: 50S ribosomal protein L40e; PFAM: Ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
     
 0.774
AEN05638.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: hbo:Hbor_12870 succinate dehydrogenase subunit A; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal.
  
 
 0.760
rpl3
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.757
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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