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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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trmYUPF0217 protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family. (198 aa)    
Predicted Functional Partners:
pus10
Conserved hypothetical protein CHP01213; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs.
 
   
 0.829
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
     0.686
AEN05541.1
PFAM: RNA polymerase II, Rpb4; KEGG: hje:HacjB3_08615 RNA polymerase RPB4.
 
     0.682
AEN07256.1
KEGG: hvo:HVO_0476 hypothetical protein.
  
     0.651
AEN06653.1
PFAM: ATPase, F0/V0 complex, subunit C; KEGG: htu:Htur_3349 hypothetical protein.
 
     0.644
rps17e
KEGG: hbo:Hbor_11080 SSU ribosomal protein s17e; HAMAP: Ribosomal protein S17e; PFAM: Ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
     0.643
AEN06694.1
Transcriptional regulator, XRE family; HAMAP: HTH-type transcriptional regulatory protein; PFAM: Helix-turn-helix type 3; KEGG: hbo:Hbor_28330 transcriptional regulator, xre family; SMART: Helix-turn-helix type 3.
  
     0.640
AEN06853.1
KEGG: hla:Hlac_0640 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
  
     0.639
truB
tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
 
   
 0.636
AEN07060.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hbo:Hbor_28820 hypothetical protein.
  
     0.611
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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