Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN05779.1KEGG: hwa:HQ2714A peptidoglycan binding protein. (84 aa)    
Predicted Functional Partners:
AEN05780.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: hvo:HVO_2702 putative hydrolase.
       0.773
AEN05781.1
KEGG: hla:Hlac_2378 hypothetical protein.
       0.519
AEN05782.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, AAA-type, CDC48; KEGG: hla:Hlac_2377 AAA family ATPase, CDC48 subfamily; PFAM: ATPase, AAA-type, core; Cell division protein 48, CDC48, domain 2; ATPase, AAA-type, VAT, N-terminal.
       0.517
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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