STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05796.1KEGG: hbo:Hbor_11350 hypothetical protein. (81 aa)    
Predicted Functional Partners:
AEN05860.1
KEGG: hla:Hlac_2496 hypothetical protein.
       0.684
AEN05797.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: hvo:HVO_2529 short-chain family oxidoreductase.
       0.642
vapC
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.465
AEN05795.1
Transcriptional regulator, AbrB family; KEGG: hsl:OE6070R hypothetical protein; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted.
       0.465
AEN05798.1
KEGG: hla:Hlac_1897 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase.
       0.446
AEN05799.1
PFAM: UbiA prenyltransferase; KEGG: hla:Hlac_1898 prenyltransferase.
       0.446
AEN05800.1
KEGG: hwa:HQ2861A carotenoid biosynthesis protein; TIGRFAM: Carotene biosynthesis associated membrane protein, type-2; PFAM: Protein of unknown function DUF422.
       0.446
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.