Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN05799.1PFAM: UbiA prenyltransferase; KEGG: hla:Hlac_1898 prenyltransferase. (279 aa)    
Predicted Functional Partners:
AEN05798.1
KEGG: hla:Hlac_1897 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase.
 
 
 0.998
AEN05800.1
KEGG: hwa:HQ2861A carotenoid biosynthesis protein; TIGRFAM: Carotene biosynthesis associated membrane protein, type-2; PFAM: Protein of unknown function DUF422.
 
   
 0.980
AEN05803.1
Phytoene synthase; KEGG: hwa:HQ2860A geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase); PFAM: Squalene/phytoene synthase.
 
  
 0.903
AEN06653.1
PFAM: ATPase, F0/V0 complex, subunit C; KEGG: htu:Htur_3349 hypothetical protein.
    
 0.708
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.681
AEN05801.1
KEGG: hwa:HQ2151A hypothetical protein.
       0.668
AEN05797.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: hvo:HVO_2529 short-chain family oxidoreductase.
     
 0.644
AEN06934.1
PFAM: UbiA prenyltransferase; KEGG: hbo:Hbor_12860 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
  
 0.630
AEN05197.1
Squalene synthase; KEGG: hbo:Hbor_21020 farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase.
 
  
 0.551
gyrA
DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.487
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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