Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN05808.1KEGG: hbo:Hbor_11570 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal. (423 aa)    
Predicted Functional Partners:
AEN05889.1
Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.
  
     0.698
AEN05802.1
Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.
  
     0.697
AEN05886.1
Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.
 
   
 0.587
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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