STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN05836.1KEGG: bts:Btus_3057 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (249 aa)    
Predicted Functional Partners:
AEN05093.1
KEGG: hla:Hlac_0706 NADH-ubiquinone oxidoreductase chain 49kDa; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit.
  
 
 0.962
AEN05835.1
PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: gau:GAU_3549 succinyl-diaminopimelate desuccinylase.
 
 
 0.824
AEN06616.1
PFAM: Sulfatase; KEGG: hvo:HVO_0069 arylsulfatase.
  
 
 0.636
AEN05834.1
KEGG: htu:Htur_3392 hypothetical protein.
       0.631
AEN05336.1
PFAM: Sulfatase; KEGG: hla:Hlac_1066 sulfatase.
  
 
 0.626
AEN06198.1
N-acetylneuraminate synthase; KEGG: bja:blr5971 polysaccharide biosynthesis related protein; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain; Xylose isomerase, TIM barrel domain.
  
  
 0.559
AEN05837.1
KEGG: hvo:HVO_A0135 hypothetical protein.
       0.517
AEN05838.1
KEGG: hvo:HVO_A0136 hypothetical protein.
       0.517
AEN05797.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: hvo:HVO_2529 short-chain family oxidoreductase.
  
     0.475
AEN05115.1
TIGRFAM: O-succinylbenzoate-CoA ligase; KEGG: hbo:Hbor_18630 O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase/ligase.
  
 
 0.432
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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