Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
AEN05865.1PFAM: Dodecin flavoprotein; KEGG: hla:Hlac_2497 protein of unknown function DUF1458. (65 aa)    
Predicted Functional Partners:
AEN05869.1
KEGG: hmu:Hmuk_2454 hypothetical protein.
 
     0.725
AEN05864.1
5'-Nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; KEGG: hbo:Hbor_11400 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase.
 
     0.600
ef1b
Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
 
     0.550
AEN05867.1
PFAM: Protein of unknown function DUF1610; KEGG: hla:Hlac_2340 protein of unknown function DUF1610.
       0.486
AEN05868.1
KEGG: hbo:Hbor_11370 hypothetical protein.
       0.484
AEN05863.1
PFAM: UspA; KEGG: hla:Hlac_1730 UspA domain protein.
       0.468
AEN05939.1
KEGG: hla:Hlac_2163 hypothetical protein.
  
     0.457
AEN04776.1
SMART: Helicase, ATP-dependent, c2 type; KEGG: hvo:HVO_0099 hypothetical protein.
  
     0.456
AEN05861.1
PFAM: Protein of unknown function DUF457, transmembrane; KEGG: hje:HacjB3_05770 hypothetical protein.
       0.455
AEN04648.1
PFAM: Ribonuclease H; KEGG: hla:Hlac_0307 ribonuclease H.
     
 0.453
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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