Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN05875.1KEGG: hvo:HVO_2770 hypothetical protein; TIGRFAM: uncharacterized protein, coenzyme F420 biosynthesis associated; Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342. (320 aa)    
Predicted Functional Partners:
AEN05874.1
Hypothetical protein.
       0.587
psmB
Proteasome endopeptidase complex, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
     0.517
nucS
UPF0286 protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.509
AEN05873.1
Cellulase; KEGG: hla:Hlac_2234 peptidase M42 family protein; PFAM: Peptidase M42.
       0.477
AEN05550.1
Like-Sm ribonucleoprotein core; KEGG: hbo:Hbor_11900 small nuclear ribonucleoprotein, lsm family; PFAM: Like-Sm ribonucleoprotein, core; SMART: Like-Sm ribonucleoprotein, core domain, eukaryotic/archaea-type.
       0.457
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
       0.450
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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