AEN05886.1 protein (halophilic archaeon DL31)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AEN05886.1

Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase. (143 aa)

Predicted Functional Partners:

AEN05887.1

0.843

AEN05884.1

0.677

AEN06097.1

0.666

AEN06716.1

0.660

AEN07098.1

0.647

AEN04797.1

0.646

AEN06615.1

0.646

AEN05169.1

0.642

AEN05889.1

0.637

AEN05802.1

0.636

Your Current Organism:

halophilic archaeon DL31

NCBI taxonomy Id: 756883
Other names: h. archaeon DL31

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEN04797.1	AEN05886.1	Halar_1034	Halar_2207	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.646
AEN04797.1	AEN06097.1	Halar_1034	Halar_2442	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.709
AEN04797.1	AEN06716.1	Halar_1034	Halar_3093	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.699
AEN05169.1	AEN05886.1	Halar_1432	Halar_2207	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.642
AEN05169.1	AEN06097.1	Halar_1432	Halar_2442	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.705
AEN05169.1	AEN06716.1	Halar_1432	Halar_3093	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.695
AEN05802.1	AEN05886.1	Halar_2119	Halar_2207	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.636
AEN05802.1	AEN06097.1	Halar_2119	Halar_2442	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.701
AEN05802.1	AEN06716.1	Halar_2119	Halar_3093	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.691
AEN05884.1	AEN05886.1	Halar_2205	Halar_2207	Protein of unknown function UPF0175; PFAM: Uncharacterised protein family UPF0175; KEGG: nmg:Nmag_0158 protein of unknown function UPF0175.	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	0.677
AEN05884.1	AEN05887.1	Halar_2205	Halar_2208	Protein of unknown function UPF0175; PFAM: Uncharacterised protein family UPF0175; KEGG: nmg:Nmag_0158 protein of unknown function UPF0175.	TIGRFAM: Transposase, IS605 OrfB, C-terminal; KEGG: hbo:Hbor_15890 transposase.	0.610
AEN05886.1	AEN04797.1	Halar_2207	Halar_1034	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.646
AEN05886.1	AEN05169.1	Halar_2207	Halar_1432	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.642
AEN05886.1	AEN05802.1	Halar_2207	Halar_2119	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.636
AEN05886.1	AEN05884.1	Halar_2207	Halar_2205	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Protein of unknown function UPF0175; PFAM: Uncharacterised protein family UPF0175; KEGG: nmg:Nmag_0158 protein of unknown function UPF0175.	0.677
AEN05886.1	AEN05887.1	Halar_2207	Halar_2208	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	TIGRFAM: Transposase, IS605 OrfB, C-terminal; KEGG: hbo:Hbor_15890 transposase.	0.843
AEN05886.1	AEN05889.1	Halar_2207	Halar_2212	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Transposase, IS605 OrfB family; KEGG: nph:NP4358A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.637
AEN05886.1	AEN06097.1	Halar_2207	Halar_2442	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.666
AEN05886.1	AEN06615.1	Halar_2207	Halar_2988	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	Transposase, IS605 OrfB family; KEGG: hwa:HQ2154A IS1341-type transposase; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal.	0.646
AEN05886.1	AEN06716.1	Halar_2207	Halar_3093	Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: hbo:Hbor_15880 transposase.	KEGG: hbo:Hbor_06170 transposase, IS605 orfB family, central region; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.	0.660