Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN05941.1UspA domain-containing protein; PFAM: UspA; KEGG: hbo:Hbor_03850 universal stress family protein. (149 aa)    
Predicted Functional Partners:
AEN05940.1
PFAM: UspA; KEGG: hvo:HVO_1823 UspA domain-containing protein.
 
     0.878
AEN05939.1
KEGG: hla:Hlac_2163 hypothetical protein.
 
     0.872
AEN07238.1
PFAM: GCN5-related N-acetyltransferase; KEGG: hbo:Hbor_09040 acetyltransferase (GNAT) family protein.
  
     0.600
AEN04776.1
SMART: Helicase, ATP-dependent, c2 type; KEGG: hvo:HVO_0099 hypothetical protein.
  
     0.575
AEN06167.1
KEGG: hvo:HVO_1134 hypothetical protein.
  
     0.546
AEN05312.1
KEGG: hvo:HVO_1595 hypothetical protein.
  
     0.538
AEN05669.1
KEGG: hmu:Hmuk_1377 hypothetical protein.
  
     0.520
AEN06883.1
KEGG: hvo:HVO_0800 transcription regulator.
  
     0.501
AEN05640.1
KEGG: hbo:Hbor_12890 succinate dehydrogenase subunit D.
  
     0.496
AEN05558.1
KEGG: hbo:Hbor_11520 hypothetical protein.
  
     0.491
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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