Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN05982.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
AEN05981.1
PFAM: Sodium/solute symporter; KEGG: bpf:BpOF4_10120 osmoregulated sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
AEN05980.1
KEGG: nmg:Nmag_3753 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; TIGRFAM: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20, dimerisation; Peptidase M20.
       0.516
AEN05983.1
KEGG: srm:SRM_02925 conserved hypothetical protein containing antibiotic biosynthesis monooxygenase domain.
       0.468
AEN05984.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; KEGG: hvo:HVO_1291 2-hydroxyhepta-24-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetase, C-terminal-like.
       0.468
AEN05979.1
KEGG: hvo:HVO_1440 hypothetical protein.
       0.436
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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