Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06042.1PFAM: Protein of unknown function DUF1508; KEGG: hma:rrnAC1613 hypothetical protein. (62 aa)    
Predicted Functional Partners:
AEN06041.1
Hypothetical protein.
       0.631
AEN06043.1
PFAM: Thioesterase superfamily; KEGG: hla:Hlac_2347 thioesterase superfamily protein.
       0.596
AEN06040.1
PcrB family protein; PFAM: Geranylgeranylglyceryl phosphate synthase-like; KEGG: hut:Huta_2960 PcrB family protein.
       0.518
AEN05504.1
PFAM: Methyltransferase type 11; KEGG: hma:pNG7268 hypothetical protein.
  
     0.513
AEN06044.1
PFAM: Transcription factor TFIIB, cyclin-related; KEGG: hbo:Hbor_15480 transcription initiation factor tfiiib, BRF1 subunit/transcription initiation factor TFIIB.
       0.480
AEN04558.1
KEGG: hvo:HVO_0721 hypothetical protein.
  
     0.447
AEN06038.1
KEGG: htu:Htur_2897 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase.
 
     0.410
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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