Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06065.1KEGG: hbo:Hbor_16120 hypothetical protein. (321 aa)    
Predicted Functional Partners:
AEN06066.1
PFAM: Protein of unknown function DUF2071; KEGG: hbo:Hbor_21740 hypothetical protein.
 
     0.631
AEN06064.1
KEGG: hbo:Hbor_21670 dipeptidyl aminopeptidase/acylaminoacyl peptidase.
       0.542
AEN06067.1
KEGG: hma:rrnAC2248 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
       0.455
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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