| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEN06088.1 | AEN06089.1 | Halar_2433 | Halar_2434 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | Hypothetical protein; Manually curated; KEGG: hut:Huta_1715 hypothetical protein. | 0.871 |
| AEN06088.1 | AEN06090.1 | Halar_2433 | Halar_2435 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: hla:Hlac_3055 copper-translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase. | 0.804 |
| AEN06088.1 | AEN06093.1 | Halar_2433 | Halar_2438 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein. | 0.633 |
| AEN06088.1 | dnaG | Halar_2433 | Halar_2581 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.669 |
| AEN06088.1 | ligA | Halar_2433 | Halar_2916 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.576 |
| AEN06088.1 | mutL | Halar_2433 | Halar_0960 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.687 |
| AEN06088.1 | pcn | Halar_2433 | Halar_3180 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.694 |
| AEN06088.1 | thrS | Halar_2433 | Halar_1622 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | KEGG: hla:Hlac_1764 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.622 |
| AEN06088.1 | topA | Halar_2433 | Halar_3221 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.825 |
| AEN06088.1 | uvrC | Halar_2433 | Halar_2279 | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.752 |
| AEN06089.1 | AEN06088.1 | Halar_2434 | Halar_2433 | Hypothetical protein; Manually curated; KEGG: hut:Huta_1715 hypothetical protein. | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | 0.871 |
| AEN06089.1 | AEN06090.1 | Halar_2434 | Halar_2435 | Hypothetical protein; Manually curated; KEGG: hut:Huta_1715 hypothetical protein. | ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: hla:Hlac_3055 copper-translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase. | 0.773 |
| AEN06090.1 | AEN06088.1 | Halar_2435 | Halar_2433 | ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: hla:Hlac_3055 copper-translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase. | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | 0.804 |
| AEN06090.1 | AEN06089.1 | Halar_2435 | Halar_2434 | ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: hla:Hlac_3055 copper-translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase. | Hypothetical protein; Manually curated; KEGG: hut:Huta_1715 hypothetical protein. | 0.773 |
| AEN06093.1 | AEN06088.1 | Halar_2438 | Halar_2433 | PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein. | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | 0.633 |
| dnaG | AEN06088.1 | Halar_2581 | Halar_2433 | UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | 0.669 |
| dnaG | pcn | Halar_2581 | Halar_3180 | UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.867 |
| dnaG | thrS | Halar_2581 | Halar_1622 | UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | KEGG: hla:Hlac_1764 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.699 |
| dnaG | topA | Halar_2581 | Halar_3221 | UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.843 |
| ligA | AEN06088.1 | Halar_2916 | Halar_2433 | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase. | 0.576 |