Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN06139.1PFAM: Ribonuclease BN-related; KEGG: hvo:HVO_2571 ribonuclease BN-like protein. (367 aa)    
Predicted Functional Partners:
AEN06138.1
KEGG: hvo:HVO_2569 hypothetical protein.
       0.631
AEN06140.1
PFAM: Protein of unknown function DUF1028; KEGG: nmg:Nmag_4048 protein of unknown function DUF1028.
       0.544
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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