Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN06191.1PFAM: PemK-like protein; KEGG: nmg:Nmag_3399 transcriptional modulator of MazE/toxin, MazF. (117 aa)    
Predicted Functional Partners:
AEN06192.1
KEGG: nmg:Nmag_3400 hypothetical protein.
       0.907
AEN05167.1
Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
  
 
 0.896
AEN04601.1
KEGG: nmg:Nmag_0890 hypothetical protein.
    
 0.565
AEN04818.1
PFAM: Helix-turn-helix, HxlR type; KEGG: hla:Hlac_2995 transcriptional regulator, HxlR family.
   
    0.476
AEN04932.1
PFAM: Helix-turn-helix, HxlR type; KEGG: hbo:Hbor_09860 transcriptional regulator.
   
    0.476
AEN05036.1
Transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; KEGG: hbo:Hbor_34250 predicted transcriptional regulator.
   
    0.476
AEN04602.1
PFAM: CopG-like DNA-binding; KEGG: hsl:OE5178F hypothetical protein.
    
 0.419
AEN06580.1
KEGG: hmu:Hmuk_1157 putative transcriptional regulator, CopG family.
    
 0.419
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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