Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN06222.1SMART: Rhodanese-like; KEGG: htu:Htur_1375 beta-lactamase domain protein. (394 aa)    
Predicted Functional Partners:
AEN07088.1
PFAM: SirA-like; KEGG: hbo:Hbor_34670 predicted redox protein, regulator of disulfide bond formation.
 
 
 0.650
AEN04719.1
TIGRFAM: Cysteine desulfurase, SufS; KEGG: hbo:Hbor_34450 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; NIF system FeS cluster assembly, NifU, N-terminal.
  
 
 0.607
rps17
Ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
  0.581
AEN06223.1
KEGG: hvo:HVO_1485 transcription anti-termination factor.
       0.551
AEN07091.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hje:HacjB3_02960 hypothetical protein.
 
    0.489
AEN05111.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hut:Huta_0259 protein of unknown function DUF395 YeeE/YedE.
 
    0.487
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
 
   0.485
AEN05365.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.484
AEN06913.1
KEGG: hvo:HVO_0441 putative metallo-beta-lactamase family hydrolase.
 
 
 0.480
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 0.476
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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