Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06225.1KEGG: hbo:Hbor_20700 hypothetical protein. (248 aa)    
Predicted Functional Partners:
AEN06489.1
Peptidase A24B, FlaK domain protein; PFAM: Peptidase A24B, preflagellin, C-terminal; Peptidase A24A, prepilin type IV; KEGG: hla:Hlac_2136 peptidase A24A prepilin type IV.
  
     0.628
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
  
     0.623
AEN05482.1
PFAM: Protein of unknown function DUF447; KEGG: hvo:HVO_2476 hypothetical protein.
  
     0.619
AEN06226.1
Shwachman-Bodian-Diamond syndrome protein; KEGG: hbo:Hbor_18900 hypothetical protein; TIGRFAM: Ribosome maturation protein SBDS; PFAM: Ribosome maturation protein SBDS, N-terminal; Ribosome maturation protein SBDS, C-terminal.
       0.608
AEN06857.1
PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: hma:rrnAC1808 hypothetical protein.
  
     0.540
AEN04598.1
PFAM: Exosortase EpsH-related; KEGG: hwa:HQ1604A hypothetical protein.
  
     0.531
AEN04562.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC2472 bacterio-opsin activator.
  
     0.528
AEN06956.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_0497 bacterio-opsin activator HTH domain protein.
  
     0.507
AEN04551.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_24640 hypothetical protein.
  
     0.505
AEN05258.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hbo:Hbor_34330 predicted DNA binding protein.
  
     0.481
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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