Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN06319.1Regulatory protein ArsR; KEGG: hma:pNG7146 transcription regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (169 aa)    
Predicted Functional Partners:
AEN06320.1
KEGG: hma:pNG6090 hypothetical protein.
       0.836
AEN06318.1
KEGG: hma:pNG6088 hypothetical protein.
       0.609
AEN06317.1
KEGG: hma:pNG6087 hypothetical protein.
       0.598
AEN07266.1
KEGG: hvo:HVO_0422 hypothetical protein.
  
     0.598
AEN06489.1
Peptidase A24B, FlaK domain protein; PFAM: Peptidase A24B, preflagellin, C-terminal; Peptidase A24A, prepilin type IV; KEGG: hla:Hlac_2136 peptidase A24A prepilin type IV.
  
     0.523
AEN05258.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hbo:Hbor_34330 predicted DNA binding protein.
  
     0.514
AEN06909.1
KEGG: hut:Huta_1767 protein of unknown function DUF99; manually curated; PFAM: Protein of unknown function DUF99.
  
     0.505
atpE
V-type proton ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.483
AEN04562.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hma:rrnAC2472 bacterio-opsin activator.
  
     0.458
AEN06856.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: hvo:HVO_0770 hypothetical protein.
  
     0.448
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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