Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN06410.1PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: hvo:HVO_1964 PRC-barrel domain-containing protein. (81 aa)    
Predicted Functional Partners:
AEN06411.1
KEGG: hvo:HVO_1965 Nob1p-like protein.
       0.907
infB
Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
     
 0.858
AEN04657.1
PFAM: Protein of unknown function DUF1621; KEGG: hvo:HVO_0392 hypothetical protein.
  
  
 0.774
AEN05138.1
PFAM: Type II secretion system F domain; KEGG: hvo:HVO_1033 type IV pilus biogenesis complex membrane subunit.
  
    0.740
AEN06273.1
PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: hvo:HVO_1691 putative PRC-barrel domain-containing protein.
  
   
 0.731
AEN04587.1
KEGG: hvo:HVO_1107 hypothetical protein; PFAM: Protein of unknown function DUF1119, archaea; SMART: Peptidase A22, presenilin signal peptide.
  
     0.711
AEN07059.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hvo:HVO_0292 replication protein A.
  
     0.709
AEN06030.1
Flagellin domain protein; KEGG: hvo:HVO_2062 hypothetical protein; TIGRFAM: Archaeal flagellin, N-terminal related; PFAM: Protein of unknown function DUF1628.
  
     0.704
secE
Preprotein translocase subunit secE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.702
AEN05424.1
PFAM: Bacterial transferase hexapeptide repeat; KEGG: hbo:Hbor_16110 acyltransferase.
  
     0.700
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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