Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06441.1PFAM: Protein of unknown function DUF433; KEGG: hwa:HQ2971A hypothetical protein. (104 aa)    
Predicted Functional Partners:
AEN05345.1
PFAM: Transcriptional regulator TrmB; KEGG: hma:rrnAC0420 sugar-specific transcriptional regulator.
  
     0.682
AEN04710.1
KEGG: hut:Huta_2746 hypothetical protein.
  
     0.675
AEN06442.1
Hypothetical protein.
       0.664
AEN06604.1
KEGG: nmg:Nmag_0695 transposase, IS605 OrfB family.
  
     0.651
AEN05887.1
TIGRFAM: Transposase, IS605 OrfB, C-terminal; KEGG: hbo:Hbor_15890 transposase.
  
     0.633
AEN05825.1
KEGG: nph:NP3792A ferredoxin I 5.
  
     0.544
AEN06838.1
KEGG: hje:HacjB3_19288 putative restriction/modification enzyme.
  
     0.535
AEN06440.1
Hypothetical protein.
       0.506
AEN05757.1
KEGG: hma:pNG6153 hypothetical protein.
  
     0.500
AEN06502.1
KEGG: hma:pNG4024 hypothetical protein.
  
     0.469
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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