Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN06443.1PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: hbo:Hbor_09240 deacylase. (357 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
       0.591
cmk
TIGRFAM: Cytidylate kinase, putative; HAMAP: Cytidylate kinase; KEGG: hvo:HVO_2494 cytidylate kinase; PFAM: Adenylate kinase.
       0.565
AEN05549.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: hvo:HVO_2852 hypothetical protein.
  
     0.486
AEN07269.1
PFAM: ATP-grasp fold, RimK-type; KEGG: hla:Hlac_2369 RimK domain protein ATP-grasp.
 
     0.467
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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