Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN06476.1PFAM: DNA topoisomerase, type IA, zn finger; KEGG: hvo:HVO_2953 topoisomerase DNA binding C4 zinc finger. (261 aa)    
Predicted Functional Partners:
endA
tRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp.
 
   
 0.922
trpS
Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp).
     
 0.892
AEN06477.1
HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: hbo:Hbor_03030 haloacid dehalogenase superfamily enzyme, subfamily IA; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase.
       0.680
AEN07001.1
Transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3; KEGG: hvo:HVO_2718 hypothetical protein.
  
     0.617
AEN04804.1
PFAM: PBS lyase HEAT-like repeat; KEGG: hbo:Hbor_21990 pbs lyase heat-like hypothetical protein.
  
     0.588
AEN05205.1
PFAM: Protein of unknown function DUF54; KEGG: hla:Hlac_0947 hypothetical protein.
  
     0.587
AEN07238.1
PFAM: GCN5-related N-acetyltransferase; KEGG: hbo:Hbor_09040 acetyltransferase (GNAT) family protein.
  
     0.549
AEN04776.1
SMART: Helicase, ATP-dependent, c2 type; KEGG: hvo:HVO_0099 hypothetical protein.
  
     0.543
AEN06478.1
KEGG: hla:Hlac_2508 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Sec63 domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal.
       0.541
AEN05692.1
PFAM: Abortive infection protein; KEGG: hma:rrnAC0355 hypothetical protein.
 
     0.518
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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