Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06544.1KEGG: hut:Huta_1113 hypothetical protein. (175 aa)    
Predicted Functional Partners:
AEN05037.1
KEGG: hut:Huta_1100 hypothetical protein.
  
     0.660
AEN04532.1
KEGG: hma:rrnAC0082 hypothetical protein.
  
     0.658
AEN07195.1
KEGG: hbo:Hbor_23540 hypothetical protein.
  
     0.647
AEN06826.1
KEGG: hmu:Hmuk_0317 hypothetical protein.
  
     0.505
AEN06543.1
RIO-like kinase; KEGG: hla:Hlac_0533 protein of unknown function RIO1; PFAM: RIO-like kinase; RIO2 kinase, winged helix, N-terminal; SMART: RIO kinase.
       0.470
AEN04519.1
Protein of unknown function UPF0118; PFAM: Uncharacterised protein family UPF0118; KEGG: hma:rrnAC3369 hypothetical protein.
  
     0.452
AEN06545.1
KEGG: htu:Htur_2384 beta-lactamase domain protein.
       0.447
AEN05345.1
PFAM: Transcriptional regulator TrmB; KEGG: hma:rrnAC0420 sugar-specific transcriptional regulator.
  
     0.423
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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