Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN06664.1PFAM: Protein of unknown function DUF54; KEGG: hla:Hlac_1856 protein of unknown function DUF54; Belongs to the UPF0201 family. (165 aa)    
Predicted Functional Partners:
AEN06663.1
KEGG: hbo:Hbor_00950 dephospho-CoA kinase.
 
    0.938
AEN06665.1
KEGG: htu:Htur_0082 hypothetical protein.
       0.773
AEN05205.1
PFAM: Protein of unknown function DUF54; KEGG: hla:Hlac_0947 hypothetical protein.
  
     0.650
AEN06641.1
PFAM: Radical SAM; KEGG: nmg:Nmag_1383 radical SAM domain protein.
  
     0.622
AEN04779.1
NMD3 family protein; PFAM: NMD3; KEGG: hbo:Hbor_01210 nmd protein affecting ribosome stability and mRNA decay.
  
     0.533
rps3ae
KEGG: hla:Hlac_0618 30S ribosomal protein S3Ae; HAMAP: 30S ribosomal protein S3Ae; PFAM: Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.507
AEN07255.1
KEGG: hla:Hlac_1971 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.476
AEN05618.1
dUTP diphosphatase; KEGG: hut:Huta_1801 deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
     0.472
pfdB
Prefoldin subunit beta; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
  
     0.470
fau-1
RNA-binding protein AU-1; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences.
  
    0.466
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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