Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN06763.1KEGG: hbo:Hbor_25990 hypothetical protein. (189 aa)    
Predicted Functional Partners:
AEN06764.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hvo:HVO_0595 cell division inhibitor.
       0.907
AEN06765.1
PFAM: Aminotransferase, class I/II; KEGG: hmu:Hmuk_0141 L-threonine-O-3-phosphate decarboxylase.
       0.620
AEN06762.1
PFAM: Major facilitator superfamily MFS-1; KEGG: htu:Htur_0189 major facilitator superfamily MFS_1.
       0.467
AEN06766.1
KEGG: avi:Avi_5916 dipeptidase; PFAM: Peptidase M19, renal dipeptidase.
       0.445
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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