Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN06797.1PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: hvo:HVO_0682 putative Mrr family endonuclease. (333 aa)    
Predicted Functional Partners:
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
       0.599
AEN07097.1
KEGG: hvo:HVO_1743 SWIM zinc finger domain-containing protein.
  
     0.577
AEN05825.1
KEGG: nph:NP3792A ferredoxin I 5.
  
   
 0.565
AEN06798.1
PFAM: Peptidase M29, aminopeptidase II; KEGG: hla:Hlac_2014 peptidase M29 aminopeptidase II.
       0.551
AEN07094.1
KEGG: hvo:HVO_1738 hypothetical protein.
  
     0.404
AEN06753.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_25840 archaeal flagella assembly protein J.
  
     0.402
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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