| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEN04669.1 | AEN06315.1 | Halar_0902 | Halar_2668 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | 0.545 |
| AEN04669.1 | fen | Halar_0902 | Halar_2605 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.630 |
| AEN04669.1 | mre11 | Halar_0902 | Halar_1305 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity; Belongs to the MRE11/RAD32 family. | 0.545 |
| AEN04669.1 | smc | Halar_0902 | Halar_3203 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.753 |
| AEN04669.1 | top6A | Halar_0902 | Halar_2637 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.414 |
| AEN04669.1 | uvrB | Halar_0902 | Halar_2932 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | 0.999 |
| AEN04669.1 | uvrC | Halar_0902 | Halar_2279 | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.999 |
| AEN06315.1 | AEN04669.1 | Halar_2668 | Halar_0902 | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | 0.545 |
| AEN06315.1 | fen | Halar_2668 | Halar_2605 | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.848 |
| AEN06315.1 | smc | Halar_2668 | Halar_3203 | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.952 |
| AEN06315.1 | top6A | Halar_2668 | Halar_2637 | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.701 |
| AEN06315.1 | topA | Halar_2668 | Halar_3221 | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.524 |
| AEN06816.1 | AEN06818.1 | Halar_3202 | Halar_3204 | PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: hbo:Hbor_25300 condensin subunit scpa. | KEGG: hvo:HVO_0688 hypothetical protein. | 0.907 |
| AEN06816.1 | smc | Halar_3202 | Halar_3203 | PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: hbo:Hbor_25300 condensin subunit scpa. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.957 |
| AEN06816.1 | topA | Halar_3202 | Halar_3221 | PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: hbo:Hbor_25300 condensin subunit scpa. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.425 |
| AEN06818.1 | AEN06816.1 | Halar_3204 | Halar_3202 | KEGG: hvo:HVO_0688 hypothetical protein. | PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: hbo:Hbor_25300 condensin subunit scpa. | 0.907 |
| AEN06818.1 | smc | Halar_3204 | Halar_3203 | KEGG: hvo:HVO_0688 hypothetical protein. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.907 |
| fen | AEN04669.1 | Halar_2605 | Halar_0902 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | KEGG: hbo:Hbor_27990 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like. | 0.630 |
| fen | AEN06315.1 | Halar_2605 | Halar_2668 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | PFAM: Metallophosphoesterase; KEGG: hla:Hlac_3236 metallophosphoesterase. | 0.848 |
| fen | mre11 | Halar_2605 | Halar_1305 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity; Belongs to the MRE11/RAD32 family. | 0.848 |