Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN06853.1KEGG: hla:Hlac_0640 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (573 aa)    
Predicted Functional Partners:
AEN06854.1
KEGG: nmg:Nmag_2833 beta-lactamase domain protein.
       0.851
trmY
UPF0217 protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
  
     0.639
AEN06852.1
KEGG: hwa:HQ1174A hypothetical protein.
       0.593
AEN06869.1
KEGG: hla:Hlac_0638 hypothetical protein.
       0.562
AEN06641.1
PFAM: Radical SAM; KEGG: nmg:Nmag_1383 radical SAM domain protein.
 
     0.527
AEN05686.1
KEGG: hla:Hlac_2039 hypothetical protein.
  
     0.526
AEN07255.1
KEGG: hla:Hlac_1971 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.506
AEN06870.1
KEGG: hbo:Hbor_24480 molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.498
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.488
AEN06851.1
Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: hje:HacjB3_00460 hypothetical protein.
       0.487
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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