Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06884.1KEGG: nph:NP1190A hypothetical protein. (62 aa)    
Predicted Functional Partners:
AEN06733.1
TIGRFAM: Pyruvate kinase; KEGG: hma:rrnAC0546 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PEP-utilising enzyme, mobile region; Belongs to the pyruvate kinase family.
       0.844
AEN06885.1
Protein of unknown function DUF107; PFAM: Nodulation efficiency, NfeD; KEGG: hla:Hlac_0560 protein of unknown function DUF107.
       0.716
AEN06883.1
KEGG: hvo:HVO_0800 transcription regulator.
       0.555
AEN06882.1
Hypothetical protein.
       0.463
AEN06886.1
Band 7 protein; KEGG: hbo:Hbor_24160 SPFH domain, band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein.
       0.438
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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