Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN06935.1PFAM: Protein of unknown function DUF547; KEGG: hbo:Hbor_21080 hypothetical protein. (234 aa)    
Predicted Functional Partners:
AEN06934.1
PFAM: UbiA prenyltransferase; KEGG: hbo:Hbor_12860 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
       0.677
AEN06933.1
PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hwa:HQ2009A thioredoxin-dependent hydroperoxide peroxidase.
 
     0.573
AEN06049.1
KEGG: nmg:Nmag_1735 hypothetical protein.
  
     0.400
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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