STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN06965.1KEGG: hla:Hlac_0006 hypothetical protein. (202 aa)    
Predicted Functional Partners:
AEN06966.1
Hypothetical protein.
       0.777
AEN05674.1
Phage shock protein A, PspA; PFAM: PspA/IM30; KEGG: hwa:HQ3029A stress response protein.
  
     0.733
radA
DNA repair and recombination protein radA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
       0.705
AEN06964.1
KEGG: hbo:Hbor_26840 hypothetical protein.
       0.693
htpX
Protease htpX; KEGG: hwa:HQ3431A heat shock protein HtpX; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p; Belongs to the peptidase M48B family.
 
     0.576
AEN05165.1
KEGG: hvo:HVO_2334 hypothetical protein.
  
     0.569
AEN06496.1
PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; KEGG: hvo:HVO_2983 hypothetical protein.
 
     0.520
AEN05482.1
PFAM: Protein of unknown function DUF447; KEGG: hvo:HVO_2476 hypothetical protein.
  
     0.493
AEN04779.1
NMD3 family protein; PFAM: NMD3; KEGG: hbo:Hbor_01210 nmd protein affecting ribosome stability and mRNA decay.
       0.457
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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