Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07046.1KEGG: hbo:Hbor_00760 hypothetical protein. (238 aa)    
Predicted Functional Partners:
AEN07045.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hla:Hlac_2674 cell division inhibitor MinD-like (chromosome partitioning ATPase).
       0.907
AEN07051.1
Transcriptional regulator, XRE family; KEGG: nph:NP5106A ATP-dependent DNA helicase (intein-containing); PFAM: DNA-dependent ATPase MCM; Helix-turn-helix type 3; SMART: DNA-dependent ATPase MCM; Hedgehog/intein hint, N-terminal; Helix-turn-helix type 3; Hedgehog/intein hint domain, C-terminal; Belongs to the MCM family.
       0.875
AEN07047.1
KEGG: hbo:Hbor_00750 hypothetical protein.
       0.870
AEN07048.1
KEGG: hbo:Hbor_00740 hypothetical protein.
       0.870
AEN07050.1
KEGG: hbo:Hbor_00730 hypothetical protein.
       0.764
AEN07049.1
KEGG: hla:Hlac_3138 hypothetical protein.
       0.569
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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