Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07060.1PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hbo:Hbor_28820 hypothetical protein. (223 aa)    
Predicted Functional Partners:
AEN07059.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hvo:HVO_0292 replication protein A.
 
   
 0.985
AEN05189.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hla:Hlac_0623 replication factor A.
 
   
 0.840
AEN06577.1
TIGRFAM: Peptidase S26B, eukaryotic signal peptidase; KEGG: hvo:HVO_0002 signal peptidase I.
  
     0.750
AEN06273.1
PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: hvo:HVO_1691 putative PRC-barrel domain-containing protein.
  
     0.728
AEN04587.1
KEGG: hvo:HVO_1107 hypothetical protein; PFAM: Protein of unknown function DUF1119, archaea; SMART: Peptidase A22, presenilin signal peptide.
  
     0.725
AEN04657.1
PFAM: Protein of unknown function DUF1621; KEGG: hvo:HVO_0392 hypothetical protein.
 
     0.720
AEN06168.1
Hypothetical protein; Manually curated; KEGG: hut:Huta_0046 hypothetical protein.
  
     0.709
AEN05586.1
PFAM: Protein of unknown function DUF2240; KEGG: hvo:HVO_2372 hypothetical protein.
  
     0.707
AEN04628.1
KEGG: hla:Hlac_0452 hypothetical protein.
  
     0.703
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.699
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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