Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AEN07066.1KEGG: htu:Htur_1955 hypothetical protein. (67 aa)    
Predicted Functional Partners:
AEN07067.1
Manually curated; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: hbo:Hbor_28920 DNA/RNA helicase, superfamily II; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal.
       0.532
AEN07068.1
TrkA-C domain protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; KEGG: hbo:Hbor_28930 di-/tricarboxylate transporter.
       0.414
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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