STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN07071.1PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein. (219 aa)    
Predicted Functional Partners:
AEN04967.1
PFAM: Bacterio-opsin activator, HTH; KEGG: hvo:HVO_A0495 bacterio-opsin activator-like protein.
  
     0.613
AEN05801.1
KEGG: hwa:HQ2151A hypothetical protein.
  
     0.603
AEN07070.1
KEGG: htu:Htur_4238 hypothetical protein.
       0.584
AEN05358.1
PFAM: Major facilitator superfamily MFS-1; KEGG: nmg:Nmag_3958 major facilitator superfamily MFS_1.
  
     0.507
AEN05522.1
KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.
  
     0.505
AEN06088.1
PFAM: DNA helicase, UvrD/REP type; KEGG: hut:Huta_1921 UvrD/REP helicase.
  
     0.505
AEN05016.1
PFAM: Major facilitator superfamily MFS-1; KEGG: hma:rrnAC1351 sugar transporter.
  
     0.502
AEN05080.1
KEGG: hla:Hlac_3228 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal.
  
     0.501
AEN04856.1
KEGG: hla:Hlac_0660 hypothetical protein.
  
     0.449
AEN06982.1
PFAM: Abortive infection protein; KEGG: hje:HacjB3_14285 abortive infection protein.
  
     0.427
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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