Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07086.1PFAM: Protein of unknown function DUF302; KEGG: hma:pNG6027 hypothetical protein. (130 aa)    
Predicted Functional Partners:
AEN07085.1
PFAM: Uncharacterised conserved protein UCP01500; KEGG: hje:HacjB3_02985 hypothetical protein.
       0.774
AEN07087.1
KEGG: hmu:Hmuk_3384 hypothetical protein.
 
     0.713
AEN07088.1
PFAM: SirA-like; KEGG: hbo:Hbor_34670 predicted redox protein, regulator of disulfide bond formation.
       0.664
AEN07089.1
SMART: Rhodanese-like; KEGG: hje:HacjB3_02970 fused rhodanese domain-containing protein/hydrolase.
 
     0.496
AEN07090.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hje:HacjB3_02965 YeeE/YedE family protein family.
       0.410
AEN07091.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hje:HacjB3_02960 hypothetical protein.
       0.410
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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