Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07092.1PFAM: Transcriptional regulator TrmB; KEGG: hje:HacjB3_02945 transcription regulator. (130 aa)    
Predicted Functional Partners:
AEN07191.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.
  
     0.616
AEN05910.1
TIGRFAM: Conserved hypothetical protein CHP01210; PFAM: Radical SAM; KEGG: hma:rrnAC3263 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.598
AEN06093.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_3425 bacterio-opsin activator HTH domain protein.
  
     0.574
AEN06680.1
PFAM: Transcriptional regulator TrmB; KEGG: hbo:Hbor_02870 transcriptional regulator.
  
     0.535
AEN05148.1
KEGG: htu:Htur_1684 hypothetical protein.
  
     0.519
AEN07090.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hje:HacjB3_02965 YeeE/YedE family protein family.
       0.506
AEN07091.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hje:HacjB3_02960 hypothetical protein.
       0.506
AEN06168.1
Hypothetical protein; Manually curated; KEGG: hut:Huta_0046 hypothetical protein.
  
     0.505
AEN05690.1
PUA domain containing protein; KEGG: hbo:Hbor_06070 tRNA-archaeosine synthase; PFAM: Pseudouridine synthase/archaeosine transglycosylase; Queuine/other tRNA-ribosyltransferase; SMART: Pseudouridine synthase/archaeosine transglycosylase.
 
     0.504
AEN05189.1
PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: hla:Hlac_0623 replication factor A.
  
     0.501
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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