Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07094.1KEGG: hvo:HVO_1738 hypothetical protein. (122 aa)    
Predicted Functional Partners:
AEN07097.1
KEGG: hvo:HVO_1743 SWIM zinc finger domain-containing protein.
 
     0.863
AEN07095.1
KEGG: hvo:HVO_1739 hypothetical protein.
       0.791
AEN07096.1
Hypothetical protein.
       0.773
AEN06446.1
PFAM: Methyltransferase type 11; KEGG: hut:Huta_1336 methyltransferase type 11.
  
     0.612
AEN05825.1
KEGG: nph:NP3792A ferredoxin I 5.
  
     0.496
AEN07093.1
KEGG: hla:Hlac_3041 hypothetical protein.
       0.453
AEN05757.1
KEGG: hma:pNG6153 hypothetical protein.
  
     0.443
AEN05100.1
TIGRFAM: Conserved hypothetical protein CHP03663; KEGG: hvo:HVO_0975 dolichyl-phosphate-mannose-proteinmannosyltransfe rase.
  
     0.420
AEN05058.1
PFAM: GtrA-like protein; KEGG: hvo:HVO_0705 GtrA-like family protein.
  
     0.410
AEN06797.1
PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: hvo:HVO_0682 putative Mrr family endonuclease.
  
     0.404
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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