Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN07118.1PFAM: SCP-like extracellular; KEGG: htu:Htur_0610 SCP-like extracellular. (199 aa)    
Predicted Functional Partners:
AEN07119.1
KEGG: hma:rrnAC2080 hypothetical protein; PFAM: PKD; SMART: PKD.
       0.785
AEN07120.1
Hypothetical protein.
       0.535
AEN04491.1
Peptidase M24; KEGG: htu:Htur_2092 peptidase M24.
 
     0.467
AEN04698.1
PFAM: Class II aldolase/adducin, N-terminal; KEGG: htu:Htur_2784 class II aldolase/adducin family protein.
 
 
 
 0.434
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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