Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN07125.1PFAM: Protein of unknown function DUF87; KEGG: hma:rrnAC0538 hypothetical protein. (867 aa)    
Predicted Functional Partners:
AEN07126.1
KEGG: nmg:Nmag_2636 hypothetical protein.
       0.775
dbh
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.
       0.722
AEN04711.1
SMART: ATPase, AAA+ type, core; KEGG: hvo:HVO_0341 hypothetical protein.
  
     0.665
AEN04551.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_24640 hypothetical protein.
  
     0.569
AEN07123.1
KEGG: nmg:Nmag_2379 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; Helix-turn-helix, type 11; SMART: Transcription regulator, AsnC-type.
 
     0.517
AEN07242.1
PFAM: Protein of unknown function DUF1405; KEGG: hvo:HVO_2515 hypothetical protein.
  
     0.493
AEN06753.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_25840 archaeal flagella assembly protein J.
  
   
 0.481
AEN05492.1
PFAM: Protein of unknown function DUF87; KEGG: hbo:Hbor_07980 ATPase.
  
     0.479
AEN06019.1
PFAM: Type II secretion system F domain; KEGG: hbo:Hbor_20820 archaeal flagella assembly protein J.
 
   
 0.462
AEN05669.1
KEGG: hmu:Hmuk_1377 hypothetical protein.
  
     0.434
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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