Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN07180.1Rubrerythrin; KEGG: hbo:Hbor_23570 rubrerythrin. (168 aa)    
Predicted Functional Partners:
AEN07181.1
Iron (metal) dependent repressor, DtxR family; KEGG: hbo:Hbor_23560 mn-dependent transcriptional regulator; PFAM: Iron dependent repressor; SMART: Iron dependent repressor.
       0.907
AEN07177.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: hbo:Hbor_23580 iron-regulated ABC transporter permease sufd.
       0.679
AEN07176.1
FeS assembly protein SufB; KEGG: hbo:Hbor_23590 iron-regulated ABC transporter membrane component sufb; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
       0.660
AEN07179.1
PFAM: Major facilitator superfamily MFS-1; KEGG: hmu:Hmuk_1882 major facilitator superfamily MFS_1.
       0.542
AEN07175.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: hla:Hlac_0176 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core.
       0.515
Your Current Organism:
halophilic archaeon DL31
NCBI taxonomy Id: 756883
Other names: h. archaeon DL31
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